CDS

Accession Number TCMCG006C17325
gbkey CDS
Protein Id XP_022559315.1
Location complement(join(5615979..5616212,5616283..5616523,5616609..5616765,5616837..5616978,5617061..5617151,5617243..5617349,5617449..5617604,5617690..5617860,5617988..5618129,5618219..5618338,5618429..5618548,5618646..5618696,5618772..5618893,5618977..5619074,5619628..5619700))
Gene LOC106400863
GeneID 106400863
Organism Brassica napus

Protein

Length 674aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022703594.1
Definition rhamnogalacturonate lyase B-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAAGAAACTGGCTGATCGGCTCTTGCATCGTTTCACCAACCATGAAACCGCTTCCAACGCCGACCACCACTGCTCAACAGGGACAGGTGAAGGTACAAGTGGTCTTAGACATAGACAGGATCGCAGGATGCCTTCTCAAGGTGTCCGGCTTTATATCAGTGACCGTTATGTTGTGATGGACAATGGAATCCTCCAAGTTACACTTTCAAATCCAGGTGGTATCATCACCGGCATAAAGTATAACGGTGTTGACAATGTGCTTGAGATTCGTAACAAGGAGACCAATAGAGGGTACTGGGACCTGCACTGGAATGAACCTGGAGGCAAGGGAATATTTGATGTCATCAGTGGAGAGAGTTTCAGGGTGATAGTCGAGACTGAAGAACAGGTCGAGATCTCATTTCTAAGAACATGGAATCCATCCCTTGAGGGGAAGTACATTCCTCTGAATATCGATAAAAGGTTTATAATGCTTCGTGGCTCTTCTGGAGTTTACACATACGGCATTTATGAACACCTTAAAGAGTGGCCTGGGTTTGAGCTTGGGGAAACAAGAATCGCCTTCAAGCTCAGAAAAGACAAATTCCATTACATGGCGGTGGCAGATGACAGAAAAAGGATAATGCCTTTTCCAGATGATCTATGCAAAGGAAGATGCCAAACTCTAGATTACCAGGAAGCTTCCTTGCTCACTGCTCCTTGTGATCCACACCTACAAGGCGAAGTAGATGACAAGTACCAATACTCATGTGAGAATAAAGATCTGAGAGTACATGGATGGATATCCTTTGATCCGCCAGTAGGATTCTGGCAAATTACGCCCAGTAATGAGTTCCGATCTGGCGGACCACTCAAACAAAACCTTACCTCACATGTTGGCCCAACCACCCTTGCAGTGTTTCACAGTACACATTATGCGGGGAAAACAATGATGCCTCGCTTTGAATGTGGTGAGCCTTGGAAGAAAGTCTATGGCCCTGTCTTCATTTACTTAAACTCCACAGCTGCTAGAGATGATTCACTCTTCTTGTGGGATGATGCTAAGATAAAGATGATGGCTGAGGTTGAAAGTTGGCCTTATAGCTTTGTGGCATCTGAGGACTACCCAAAGTCTGAAGAACGTGGCACTGCCCGTGGTAGATTACTTGTTTGCGATAGGTTCGTAAGCAATGATTTGATTTCAGCACAAGGTGCTTATGTGGGTTTGGCTCCACCTGGTGATGCTGGTTCCTGGCAAATAGAATGCAAGGGATACCAATTTTGGGCGATAGCAGATGAGGCTGGCTACTTTTCGATAGACAATGTGCGTCCTGGCGAGTACAATCTCTATGCATGGGTCCCTGGCTTCATTGGAGATTATCATAACAACATTGTTGTTTCTGTGACTTCAGGGTGCAAGATTGAAATGGGTGATATCGTCTATGAACCTCCAAGAGATGGACCTACCTTGTGGGAAATCGGCATCCCCGACCGAAAAGCTTCCGAGTTCTTTATCCCAGATCCTGATCCCACTCTCGTAAACAGAGTTTTAGTCCAGCCTCAAGACAGGTTCAGGCAATATGGTTTGTGGAAGAGATACACAGATTTGTATCCAAATAATGACCTTGTTTACACAATTGGTGTAAGCGATTACCGCAGAGACTGGTTCTTTGCTCATGTGCCTAGGAAGAAAGGAGATGGGCACGAAGGAACAACTTGGCAGATTAGGTTTAAACTCGAAAACATTGATCAAAAGGCGAATTACAAACTGCGAGTAGCCATAGCATCTGCAACCTTAGCAGAGTTGCAGGTGAGACTCAATGATGCTGAAGCAACACGTCCTTTGTTCACAACCGGACTTATAGGGAGAGACAACTCGATTGCAAGGCACGGTATCCACGGGGTTTACATGCTGTACACGGTGAACATACCGGGAAACAGGTTTGTGCAAGGTGATAACACGATATTCCTGAAACAGCCAAGATGCAATGGCCCCTTTCAAGGGATTATGTATGACTACATTCGTCTTGAAGGCTCTCCTTAA
Protein:  
MKKLADRLLHRFTNHETASNADHHCSTGTGEGTSGLRHRQDRRMPSQGVRLYISDRYVVMDNGILQVTLSNPGGIITGIKYNGVDNVLEIRNKETNRGYWDLHWNEPGGKGIFDVISGESFRVIVETEEQVEISFLRTWNPSLEGKYIPLNIDKRFIMLRGSSGVYTYGIYEHLKEWPGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDPHLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTTLAVFHSTHYAGKTMMPRFECGEPWKKVYGPVFIYLNSTAARDDSLFLWDDAKIKMMAEVESWPYSFVASEDYPKSEERGTARGRLLVCDRFVSNDLISAQGAYVGLAPPGDAGSWQIECKGYQFWAIADEAGYFSIDNVRPGEYNLYAWVPGFIGDYHNNIVVSVTSGCKIEMGDIVYEPPRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVQPQDRFRQYGLWKRYTDLYPNNDLVYTIGVSDYRRDWFFAHVPRKKGDGHEGTTWQIRFKLENIDQKANYKLRVAIASATLAELQVRLNDAEATRPLFTTGLIGRDNSIARHGIHGVYMLYTVNIPGNRFVQGDNTIFLKQPRCNGPFQGIMYDYIRLEGSP